Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc5Q8CG46 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Gm13312-201ENSMUST00000119631 718 ntBASIC19.37■□□□□ 0.69
Smc5Q8CG46 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.37■□□□□ 0.69
Smc5Q8CG46 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Efs-202ENSMUST00000227037 2540 ntBASIC19.37■□□□□ 0.69
Smc5Q8CG46 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc5Q8CG46 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.36■□□□□ 0.69
Smc5Q8CG46 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc5Q8CG46 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.35■□□□□ 0.69
Smc5Q8CG46 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC19.35■□□□□ 0.69
Smc5Q8CG46 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.35■□□□□ 0.69
Smc5Q8CG46 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Smc5Q8CG46 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.34■□□□□ 0.69
Smc5Q8CG46 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smc5Q8CG46 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Mir6982-201ENSMUST00000184354 68 ntBASIC19.34■□□□□ 0.69
Smc5Q8CG46 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.34■□□□□ 0.69
Smc5Q8CG46 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smc5Q8CG46 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms