Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lysmd4Q8CC84 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Gm44430-201ENSMUST00000203376 995 ntBASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lysmd4Q8CC84 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Gm37055-201ENSMUST00000191866 133 ntBASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lysmd4Q8CC84 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd4Q8CC84 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd4Q8CC84 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd4Q8CC84 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd4Q8CC84 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lysmd4Q8CC84 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms