Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Gm4899-201ENSMUST00000178708 719 ntBASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.24■□□□□ 0.51
Alx1Q8C8B0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Alx1Q8C8B0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.22■□□□□ 0.51
Alx1Q8C8B0 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Alx1Q8C8B0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Alx1Q8C8B0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms