Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Gm22175-201ENSMUST00000175007 78 ntBASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a6Q8C6K9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Gm25287-201ENSMUST00000103846 110 ntBASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Gm22918-201ENSMUST00000103855 110 ntBASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Gm5866-201ENSMUST00000177881 973 ntBASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Gm2423-201ENSMUST00000074863 733 ntBASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.09□□□□□ -0.15
Col6a6Q8C6K9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a6Q8C6K9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Gm12008-201ENSMUST00000117791 755 ntBASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Gm13223-201ENSMUST00000118609 747 ntBASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a6Q8C6K9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a6Q8C6K9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a6Q8C6K9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.07□□□□□ -0.16
Col6a6Q8C6K9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a6Q8C6K9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a6Q8C6K9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a6Q8C6K9 Gm7774-201ENSMUST00000200064 533 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms