Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp44Q8C2S0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp44Q8C2S0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Gm11452-201ENSMUST00000122376 690 ntBASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Gm5864-201ENSMUST00000202263 970 ntBASIC18.32■□□□□ 0.52
Usp44Q8C2S0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.32■□□□□ 0.52
Usp44Q8C2S0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Usp44Q8C2S0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.31■□□□□ 0.52
Usp44Q8C2S0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp44Q8C2S0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Gm13884-201ENSMUST00000118103 829 ntBASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Gm5682-201ENSMUST00000173402 505 ntBASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp44Q8C2S0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Mir8098-201ENSMUST00000184011 137 ntBASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Usp44Q8C2S0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Gm7230-201ENSMUST00000173026 815 ntBASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp44Q8C2S0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms