Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 AA414768-201ENSMUST00000121924 1257 ntBASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm18959-201ENSMUST00000208954 655 ntBASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm10052-201ENSMUST00000168019 960 ntBASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm6345-202ENSMUST00000180900 204 ntBASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm37722-201ENSMUST00000193757 208 ntBASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm7729-201ENSMUST00000050143 801 ntBASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ppp1r3eQ8BRJ4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm33142-201ENSMUST00000193913 867 ntBASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms