Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.06■□□□□ 0.16
Chmp2bQ8BJF9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Mir770-201ENSMUST00000103252 94 ntBASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Gm6433-201ENSMUST00000118634 875 ntBASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.05■□□□□ 0.16
Chmp2bQ8BJF9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Mir6982-201ENSMUST00000184354 68 ntBASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Gm18032-201ENSMUST00000222541 538 ntBASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2bQ8BJF9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms