Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Gm2810-201ENSMUST00000118681 990 ntBASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Gm17837-201ENSMUST00000186435 985 ntBASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Gm43767-201ENSMUST00000198933 381 ntBASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Trnp1Q80ZI1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trnp1Q80ZI1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trnp1Q80ZI1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trnp1Q80ZI1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trnp1Q80ZI1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trnp1Q80ZI1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Trnp1Q80ZI1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trnp1Q80ZI1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Gm13453-201ENSMUST00000118708 357 ntBASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Gm38294-201ENSMUST00000192831 381 ntBASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trnp1Q80ZI1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Gm14722-201ENSMUST00000118943 689 ntBASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Gm10499-201ENSMUST00000174094 934 ntBASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trnp1Q80ZI1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Gm9824-201ENSMUST00000178707 561 ntBASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trnp1Q80ZI1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms