Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.28□□□□□ -0.28
Upk3bQ80YF6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk3bQ80YF6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Upk3bQ80YF6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.27□□□□□ -0.28
Upk3bQ80YF6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk3bQ80YF6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk3bQ80YF6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Upk3bQ80YF6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Upk3bQ80YF6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Upk3bQ80YF6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk3bQ80YF6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Upk3bQ80YF6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Gm15039-201ENSMUST00000118914 875 ntBASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Gm6257-201ENSMUST00000163864 910 ntBASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Mir5130-201ENSMUST00000175160 84 ntBASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Gm22240-201ENSMUST00000175225 82 ntBASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Gm29257-201ENSMUST00000186115 639 ntBASIC13.27□□□□□ -0.29
Upk3bQ80YF6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3bQ80YF6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Gm13436-201ENSMUST00000120418 567 ntBASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.26□□□□□ -0.29
Upk3bQ80YF6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.26□□□□□ -0.29
Upk3bQ80YF6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms