Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Gm13365-201ENSMUST00000121188 973 ntBASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Grk6-207ENSMUST00000225925 2769 ntBASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp6nlQ80XC3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Haglr-201ENSMUST00000100000 2085 ntBASIC17.24■□□□□ 0.35
Usp6nlQ80XC3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Gm13616-201ENSMUST00000120600 222 ntBASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.23■□□□□ 0.35
Usp6nlQ80XC3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Usp6nlQ80XC3 Gm14057-201ENSMUST00000120631 482 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms