Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prpf40bQ80W14 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prpf40bQ80W14 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf40bQ80W14 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Gm8396-201ENSMUST00000057361 823 ntBASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Prpf40bQ80W14 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Prpf40bQ80W14 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prpf40bQ80W14 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prpf40bQ80W14 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prpf40bQ80W14 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.02■□□□□ 0.47
Prpf40bQ80W14 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prpf40bQ80W14 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.02■□□□□ 0.47
Prpf40bQ80W14 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.02■□□□□ 0.47
Prpf40bQ80W14 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prpf40bQ80W14 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prpf40bQ80W14 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prpf40bQ80W14 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prpf40bQ80W14 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.01■□□□□ 0.47
Prpf40bQ80W14 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Prpf40bQ80W14 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf40bQ80W14 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.01■□□□□ 0.47
Prpf40bQ80W14 Gm43438-201ENSMUST00000198133 379 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms