Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg5Q71M36 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg5Q71M36 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.24■□□□□ 0.19
Cspg5Q71M36 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Gm9727-201ENSMUST00000161387 555 ntBASIC16.24■□□□□ 0.19
Cspg5Q71M36 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cspg5Q71M36 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg5Q71M36 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg5Q71M36 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cspg5Q71M36 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg5Q71M36 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Cspg5Q71M36 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms