Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Gm6415-201ENSMUST00000118488 348 ntBASIC13.17□□□□□ -0.3
Rif1Q6PR54 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.17□□□□□ -0.3
Rif1Q6PR54 Gm8062-201ENSMUST00000139696 444 ntBASIC13.17□□□□□ -0.3
Rif1Q6PR54 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Gm18489-201ENSMUST00000172565 551 ntBASIC13.17□□□□□ -0.3
Rif1Q6PR54 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Gm22189-201ENSMUST00000103822 86 ntBASIC13.16□□□□□ -0.3
Rif1Q6PR54 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Gm29667-201ENSMUST00000190817 490 ntBASIC13.16□□□□□ -0.3
Rif1Q6PR54 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.16□□□□□ -0.3
Rif1Q6PR54 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.16□□□□□ -0.3
Rif1Q6PR54 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rif1Q6PR54 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.15□□□□□ -0.3
Rif1Q6PR54 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.15□□□□□ -0.3
Rif1Q6PR54 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Gm6973-201ENSMUST00000117080 721 ntBASIC13.15□□□□□ -0.3
Rif1Q6PR54 Gm18737-201ENSMUST00000173594 937 ntBASIC13.15□□□□□ -0.3
Rif1Q6PR54 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Rif1Q6PR54 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.14□□□□□ -0.31
Rif1Q6PR54 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.14□□□□□ -0.31
Rif1Q6PR54 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Gm42612-201ENSMUST00000197986 623 ntBASIC13.14□□□□□ -0.31
Rif1Q6PR54 Gm43170-201ENSMUST00000199827 612 ntBASIC13.14□□□□□ -0.31
Rif1Q6PR54 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.14□□□□□ -0.31
Rif1Q6PR54 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.14□□□□□ -0.31
Rif1Q6PR54 Gm18049-201ENSMUST00000208909 581 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms