Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShbQ6PD21 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
ShbQ6PD21 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ShbQ6PD21 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShbQ6PD21 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ShbQ6PD21 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShbQ6PD21 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShbQ6PD21 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.81■□□□□ 0.28
ShbQ6PD21 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShbQ6PD21 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShbQ6PD21 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShbQ6PD21 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ShbQ6PD21 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShbQ6PD21 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.81■□□□□ 0.28
ShbQ6PD21 Gm6180-201ENSMUST00000065243 498 ntBASIC16.81■□□□□ 0.28
ShbQ6PD21 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShbQ6PD21 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShbQ6PD21 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShbQ6PD21 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ShbQ6PD21 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.81■□□□□ 0.28
ShbQ6PD21 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.8■□□□□ 0.28
ShbQ6PD21 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShbQ6PD21 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ShbQ6PD21 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShbQ6PD21 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShbQ6PD21 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShbQ6PD21 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.8■□□□□ 0.28
ShbQ6PD21 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShbQ6PD21 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ShbQ6PD21 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ShbQ6PD21 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.8■□□□□ 0.28
ShbQ6PD21 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ShbQ6PD21 Gm6745-201ENSMUST00000199216 526 ntBASIC16.8■□□□□ 0.28
ShbQ6PD21 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShbQ6PD21 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShbQ6PD21 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ShbQ6PD21 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShbQ6PD21 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShbQ6PD21 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.8■□□□□ 0.28
ShbQ6PD21 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShbQ6PD21 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
ShbQ6PD21 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShbQ6PD21 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ShbQ6PD21 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ShbQ6PD21 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ShbQ6PD21 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ShbQ6PD21 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShbQ6PD21 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShbQ6PD21 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShbQ6PD21 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShbQ6PD21 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ShbQ6PD21 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.79■□□□□ 0.28
ShbQ6PD21 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.79■□□□□ 0.28
ShbQ6PD21 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.79■□□□□ 0.28
ShbQ6PD21 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.79■□□□□ 0.28
ShbQ6PD21 Gm23984-201ENSMUST00000157139 203 ntBASIC16.79■□□□□ 0.28
ShbQ6PD21 Gm29667-201ENSMUST00000190817 490 ntBASIC16.79■□□□□ 0.28
ShbQ6PD21 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.79■□□□□ 0.28
ShbQ6PD21 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ShbQ6PD21 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShbQ6PD21 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShbQ6PD21 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ShbQ6PD21 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShbQ6PD21 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShbQ6PD21 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.78■□□□□ 0.28
ShbQ6PD21 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShbQ6PD21 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShbQ6PD21 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ShbQ6PD21 Gm12138-201ENSMUST00000122180 951 ntBASIC16.78■□□□□ 0.28
ShbQ6PD21 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.78■□□□□ 0.28
ShbQ6PD21 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.78■□□□□ 0.28
ShbQ6PD21 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShbQ6PD21 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.78■□□□□ 0.28
ShbQ6PD21 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.78■□□□□ 0.28
ShbQ6PD21 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ShbQ6PD21 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
ShbQ6PD21 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShbQ6PD21 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShbQ6PD21 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShbQ6PD21 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShbQ6PD21 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.78■□□□□ 0.28
ShbQ6PD21 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShbQ6PD21 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.77■□□□□ 0.28
ShbQ6PD21 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.77■□□□□ 0.28
ShbQ6PD21 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ShbQ6PD21 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.77■□□□□ 0.28
ShbQ6PD21 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.77■□□□□ 0.28
ShbQ6PD21 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
ShbQ6PD21 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ShbQ6PD21 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
ShbQ6PD21 Gm44719-201ENSMUST00000206404 149 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms