Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Gm27618-201ENSMUST00000183671 60 ntBASIC18.4■□□□□ 0.54
Ltn1Q6A009 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ltn1Q6A009 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.4■□□□□ 0.54
Ltn1Q6A009 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ltn1Q6A009 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ltn1Q6A009 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.39■□□□□ 0.53
Ltn1Q6A009 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ltn1Q6A009 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ltn1Q6A009 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ltn1Q6A009 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Ltn1Q6A009 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Ltn1Q6A009 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ltn1Q6A009 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ltn1Q6A009 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ltn1Q6A009 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ltn1Q6A009 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.38■□□□□ 0.53
Ltn1Q6A009 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ltn1Q6A009 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ltn1Q6A009 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Ltn1Q6A009 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ltn1Q6A009 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ltn1Q6A009 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.38■□□□□ 0.53
Ltn1Q6A009 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ltn1Q6A009 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ltn1Q6A009 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.37■□□□□ 0.53
Ltn1Q6A009 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.37■□□□□ 0.53
Ltn1Q6A009 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Gm12151-201ENSMUST00000121374 290 ntBASIC18.37■□□□□ 0.53
Ltn1Q6A009 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Gm2423-201ENSMUST00000074863 733 ntBASIC18.37■□□□□ 0.53
Ltn1Q6A009 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ltn1Q6A009 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ltn1Q6A009 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ltn1Q6A009 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ltn1Q6A009 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms