Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox19Q62249 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox19Q62249 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox19Q62249 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox19Q62249 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.4□□□□□ -0.27
Sox19Q62249 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sox19Q62249 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox19Q62249 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sox19Q62249 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.39□□□□□ -0.27
Sox19Q62249 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.39□□□□□ -0.27
Sox19Q62249 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.39□□□□□ -0.27
Sox19Q62249 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.39□□□□□ -0.27
Sox19Q62249 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.39□□□□□ -0.27
Sox19Q62249 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.39□□□□□ -0.27
Sox19Q62249 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.39□□□□□ -0.27
Sox19Q62249 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sox19Q62249 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sox19Q62249 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
Sox19Q62249 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox19Q62249 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sox19Q62249 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox19Q62249 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Sox19Q62249 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Sox19Q62249 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.38□□□□□ -0.27
Sox19Q62249 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sox19Q62249 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Sox19Q62249 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sox19Q62249 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sox19Q62249 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Sox19Q62249 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Sox19Q62249 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sox19Q62249 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Sox19Q62249 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox19Q62249 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sox19Q62249 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox19Q62249 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox19Q62249 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox19Q62249 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox19Q62249 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox19Q62249 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.37□□□□□ -0.27
Sox19Q62249 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox19Q62249 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox19Q62249 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.37□□□□□ -0.27
Sox19Q62249 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms