Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC20.95■□□□□ 0.94
Gli3Q61602 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Gli3Q61602 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gli3Q61602 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gli3Q61602 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Gli3Q61602 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gli3Q61602 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gli3Q61602 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gli3Q61602 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gli3Q61602 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gli3Q61602 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gli3Q61602 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gli3Q61602 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC20.94■□□□□ 0.94
Gli3Q61602 Cd63-ps-201ENSMUST00000145417 875 ntBASIC20.94■□□□□ 0.94
Gli3Q61602 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gli3Q61602 Gm21854-201ENSMUST00000179901 471 ntBASIC20.94■□□□□ 0.94
Gli3Q61602 Gm3436-201ENSMUST00000179930 840 ntBASIC20.94■□□□□ 0.94
Gli3Q61602 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC20.94■□□□□ 0.94
Gli3Q61602 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC20.94■□□□□ 0.94
Gli3Q61602 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.94■□□□□ 0.94
Gli3Q61602 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gli3Q61602 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gli3Q61602 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gli3Q61602 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gli3Q61602 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gli3Q61602 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gli3Q61602 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gli3Q61602 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gli3Q61602 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.93■□□□□ 0.94
Gli3Q61602 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gli3Q61602 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gli3Q61602 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC20.93■□□□□ 0.94
Gli3Q61602 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gli3Q61602 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC20.93■□□□□ 0.94
Gli3Q61602 Gm9002-201ENSMUST00000178437 499 ntBASIC20.93■□□□□ 0.94
Gli3Q61602 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gli3Q61602 AC158529.1-201ENSMUST00000223618 239 ntBASIC20.93■□□□□ 0.94
Gli3Q61602 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gli3Q61602 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gli3Q61602 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.93■□□□□ 0.94
Gli3Q61602 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gli3Q61602 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Gli3Q61602 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gli3Q61602 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gli3Q61602 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gli3Q61602 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gli3Q61602 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gli3Q61602 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gli3Q61602 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gli3Q61602 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gli3Q61602 Gm5566-201ENSMUST00000116118 459 ntBASIC20.93■□□□□ 0.94
Gli3Q61602 Mir1982-201ENSMUST00000157368 74 ntBASIC20.93■□□□□ 0.94
Gli3Q61602 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Gli3Q61602 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC20.93■□□□□ 0.94
Gli3Q61602 AC090659.2-201ENSMUST00000225378 1186 ntBASIC20.93■□□□□ 0.94
Gli3Q61602 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC20.93■□□□□ 0.94
Gli3Q61602 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gli3Q61602 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gli3Q61602 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gli3Q61602 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC20.92■□□□□ 0.94
Gli3Q61602 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gli3Q61602 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Gli3Q61602 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC20.92■□□□□ 0.94
Gli3Q61602 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC20.92■□□□□ 0.94
Gli3Q61602 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC20.92■□□□□ 0.94
Gli3Q61602 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gli3Q61602 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gli3Q61602 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gli3Q61602 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gli3Q61602 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gli3Q61602 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gli3Q61602 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Gli3Q61602 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gli3Q61602 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gli3Q61602 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gli3Q61602 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gli3Q61602 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gli3Q61602 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC20.91■□□□□ 0.94
Gli3Q61602 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gli3Q61602 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gli3Q61602 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gli3Q61602 Gm7619-201ENSMUST00000210649 1282 ntBASIC20.91■□□□□ 0.94
Gli3Q61602 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gli3Q61602 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gli3Q61602 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gli3Q61602 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Gli3Q61602 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.91■□□□□ 0.94
Gli3Q61602 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Gli3Q61602 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gli3Q61602 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gli3Q61602 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gli3Q61602 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gli3Q61602 Gm13233-201ENSMUST00000118760 1443 ntBASIC20.9■□□□□ 0.94
Gli3Q61602 Gm13244-201ENSMUST00000118855 1446 ntBASIC20.9■□□□□ 0.94
Gli3Q61602 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gli3Q61602 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gli3Q61602 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gli3Q61602 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Gli3Q61602 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.9■□□□□ 0.94
Gli3Q61602 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms