Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm37055-201ENSMUST00000191866 133 ntBASIC14.95□□□□□ -0.02
Nr1h4Q60641 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Gm7729-201ENSMUST00000050143 801 ntBASIC14.95□□□□□ -0.02
Nr1h4Q60641 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.95□□□□□ -0.02
Nr1h4Q60641 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Gm45058-201ENSMUST00000205810 766 ntBASIC14.94□□□□□ -0.02
Nr1h4Q60641 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Nr1h4Q60641 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.93□□□□□ -0.02
Nr1h4Q60641 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.93□□□□□ -0.02
Nr1h4Q60641 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.93□□□□□ -0.02
Nr1h4Q60641 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.93□□□□□ -0.02
Nr1h4Q60641 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nr1h4Q60641 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Gm27011-201ENSMUST00000182352 972 ntBASIC14.92□□□□□ -0.02
Nr1h4Q60641 Gm27389-201ENSMUST00000183622 195 ntBASIC14.92□□□□□ -0.02
Nr1h4Q60641 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.92□□□□□ -0.02
Nr1h4Q60641 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nr1h4Q60641 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nr1h4Q60641 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nr1h4Q60641 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1h4Q60641 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.91□□□□□ -0.02
Nr1h4Q60641 Gm37722-201ENSMUST00000193757 208 ntBASIC14.91□□□□□ -0.02
Nr1h4Q60641 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nr1h4Q60641 Gm18959-201ENSMUST00000208954 655 ntBASIC14.91□□□□□ -0.02
Nr1h4Q60641 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms