Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Gm21596-201ENSMUST00000178049 1316 ntBASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-3Q5R1C3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav3-3Q5R1C3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Gm37820-201ENSMUST00000194021 2147 ntBASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-3Q5R1C3 Dio3-201ENSMUST00000097228 1449 ntBASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms