Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Gm5161-201ENSMUST00000075243 853 ntBASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC9.2□□□□□ -0.94
Herc2Q4U2R1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Gm9719-201ENSMUST00000162765 543 ntBASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Dupd1-202ENSMUST00000224735 548 ntBASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Gm24514-201ENSMUST00000174961 285 ntBASIC9.19□□□□□ -0.94
Herc2Q4U2R1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Mir1897-201ENSMUST00000122581 272 ntBASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Herc2Q4U2R1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Gm43138-201ENSMUST00000199123 708 ntBASIC9.18□□□□□ -0.94
Herc2Q4U2R1 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC9.18□□□□□ -0.94
Herc2Q4U2R1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Herc2Q4U2R1 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Gm9797-201ENSMUST00000052902 613 ntBASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Mir692-1-201ENSMUST00000102263 109 ntBASIC9.17□□□□□ -0.94
Herc2Q4U2R1 Gm10327-201ENSMUST00000105222 1002 ntBASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms