Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ckap2Q3V1H1 Asic1-205ENSMUST00000228185 1818 ntBASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ckap2Q3V1H1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Mir8098-201ENSMUST00000184011 137 ntBASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap2Q3V1H1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Gm7230-201ENSMUST00000173026 815 ntBASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Ckap2Q3V1H1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Gm13884-201ENSMUST00000118103 829 ntBASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms