Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Gm13597-201ENSMUST00000121239 375 ntBASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Gm25911-201ENSMUST00000157621 56 ntBASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Mir8117-201ENSMUST00000184773 107 ntBASIC16.9■□□□□ 0.3
Snx27Q3UHD6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Snx27Q3UHD6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Snx27Q3UHD6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Snx27Q3UHD6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Snx27Q3UHD6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Snx27Q3UHD6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Gm27702-201ENSMUST00000184512 56 ntBASIC16.89■□□□□ 0.29
Snx27Q3UHD6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Snx27Q3UHD6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Snx27Q3UHD6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Snx27Q3UHD6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Snx27Q3UHD6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Snx27Q3UHD6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Snx27Q3UHD6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Snx27Q3UHD6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Snx27Q3UHD6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Snx27Q3UHD6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Snx27Q3UHD6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Snx27Q3UHD6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Snx27Q3UHD6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Snx27Q3UHD6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Snx27Q3UHD6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms