Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Khdc4Q3TCX3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Gm15173-201ENSMUST00000122049 433 ntBASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Gm4535-201ENSMUST00000182274 558 ntBASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Gm10355-201ENSMUST00000097146 517 ntBASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Khdc4Q3TCX3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Gm11594-201ENSMUST00000122313 162 ntBASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Gm8000-201ENSMUST00000188378 592 ntBASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Khdc4Q3TCX3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Mir5126-201ENSMUST00000175513 77 ntBASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Khdc4Q3TCX3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms