Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ssrp1Q08943 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ssrp1Q08943 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ssrp1Q08943 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ssrp1Q08943 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssrp1Q08943 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ssrp1Q08943 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssrp1Q08943 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssrp1Q08943 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssrp1Q08943 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssrp1Q08943 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssrp1Q08943 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssrp1Q08943 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ssrp1Q08943 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssrp1Q08943 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssrp1Q08943 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.42■□□□□ 0.38
Ssrp1Q08943 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssrp1Q08943 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.41■□□□□ 0.38
Ssrp1Q08943 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ssrp1Q08943 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.41■□□□□ 0.38
Ssrp1Q08943 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.41■□□□□ 0.38
Ssrp1Q08943 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.41■□□□□ 0.38
Ssrp1Q08943 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ssrp1Q08943 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ssrp1Q08943 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ssrp1Q08943 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssrp1Q08943 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssrp1Q08943 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.4■□□□□ 0.38
Ssrp1Q08943 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssrp1Q08943 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssrp1Q08943 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssrp1Q08943 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssrp1Q08943 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ssrp1Q08943 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.4■□□□□ 0.38
Ssrp1Q08943 Gm14859-201ENSMUST00000117752 357 ntBASIC17.4■□□□□ 0.38
Ssrp1Q08943 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Ssrp1Q08943 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssrp1Q08943 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ssrp1Q08943 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.4■□□□□ 0.38
Ssrp1Q08943 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.4■□□□□ 0.38
Ssrp1Q08943 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.4■□□□□ 0.38
Ssrp1Q08943 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms