Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Atf4Q06507 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Atf4Q06507 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Atf4Q06507 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.9□□□□□ -0.02
Atf4Q06507 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.9□□□□□ -0.02
Atf4Q06507 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Atf4Q06507 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.9□□□□□ -0.02
Atf4Q06507 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Atf4Q06507 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Atf4Q06507 Gm12849-201ENSMUST00000120013 739 ntBASIC14.9□□□□□ -0.02
Atf4Q06507 Gm27397-201ENSMUST00000184997 107 ntBASIC14.9□□□□□ -0.02
Atf4Q06507 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.9□□□□□ -0.02
Atf4Q06507 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
Atf4Q06507 Gm45878-201ENSMUST00000211839 241 ntBASIC14.9□□□□□ -0.02
Atf4Q06507 CT009754.4-201ENSMUST00000221430 565 ntBASIC14.9□□□□□ -0.02
Atf4Q06507 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.9□□□□□ -0.02
Atf4Q06507 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Atf4Q06507 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Atf4Q06507 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atf4Q06507 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf4Q06507 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf4Q06507 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Atf4Q06507 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Atf4Q06507 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf4Q06507 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf4Q06507 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Atf4Q06507 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Atf4Q06507 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf4Q06507 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.89□□□□□ -0.03
Atf4Q06507 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf4Q06507 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Atf4Q06507 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Atf4Q06507 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf4Q06507 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.89□□□□□ -0.03
Atf4Q06507 Gm4995-201ENSMUST00000117247 432 ntBASIC14.89□□□□□ -0.03
Atf4Q06507 Gm13418-201ENSMUST00000119097 944 ntBASIC14.89□□□□□ -0.03
Atf4Q06507 Gm14140-201ENSMUST00000119999 995 ntBASIC14.89□□□□□ -0.03
Atf4Q06507 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.89□□□□□ -0.03
Atf4Q06507 Gm9727-201ENSMUST00000161387 555 ntBASIC14.89□□□□□ -0.03
Atf4Q06507 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.89□□□□□ -0.03
Atf4Q06507 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.89□□□□□ -0.03
Atf4Q06507 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.89□□□□□ -0.03
Atf4Q06507 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.89□□□□□ -0.03
Atf4Q06507 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atf4Q06507 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf4Q06507 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf4Q06507 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atf4Q06507 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf4Q06507 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Atf4Q06507 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atf4Q06507 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Atf4Q06507 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Atf4Q06507 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atf4Q06507 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.88□□□□□ -0.03
Atf4Q06507 Gm14667-201ENSMUST00000119448 1350 ntBASIC14.88□□□□□ -0.03
Atf4Q06507 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Atf4Q06507 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Gm12260-201ENSMUST00000122447 411 ntBASIC14.88□□□□□ -0.03
Atf4Q06507 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.88□□□□□ -0.03
Atf4Q06507 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.88□□□□□ -0.03
Atf4Q06507 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.88□□□□□ -0.03
Atf4Q06507 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.88□□□□□ -0.03
Atf4Q06507 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.88□□□□□ -0.03
Atf4Q06507 AV026068-213ENSMUST00000223675 1171 ntBASIC14.88□□□□□ -0.03
Atf4Q06507 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.88□□□□□ -0.03
Atf4Q06507 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms