Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Notch1Q01705 Gm18187-201ENSMUST00000196476 984 ntBASIC11.32□□□□□ -0.6
Notch1Q01705 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Notch1Q01705 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch1Q01705 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch1Q01705 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch1Q01705 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Notch1Q01705 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
Notch1Q01705 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.31□□□□□ -0.6
Notch1Q01705 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Notch1Q01705 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Notch1Q01705 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Notch1Q01705 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.31□□□□□ -0.6
Notch1Q01705 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Notch1Q01705 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.31□□□□□ -0.6
Notch1Q01705 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Notch1Q01705 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Notch1Q01705 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.31□□□□□ -0.6
Notch1Q01705 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.31□□□□□ -0.6
Notch1Q01705 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Notch1Q01705 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Notch1Q01705 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Gm43294-201ENSMUST00000202850 2490 ntBASIC11.3□□□□□ -0.6
Notch1Q01705 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Notch1Q01705 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Notch1Q01705 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.3□□□□□ -0.6
Notch1Q01705 Gm5779-201ENSMUST00000218467 910 ntBASIC11.3□□□□□ -0.6
Notch1Q01705 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.3□□□□□ -0.6
Notch1Q01705 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.3□□□□□ -0.6
Notch1Q01705 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.3□□□□□ -0.6
Notch1Q01705 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Notch1Q01705 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Notch1Q01705 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.29□□□□□ -0.6
Notch1Q01705 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Notch1Q01705 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Notch1Q01705 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Notch1Q01705 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Notch1Q01705 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms