Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cacna1aP97445 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Gm18489-201ENSMUST00000172565 551 ntBASIC14.42□□□□□ -0.1
Cacna1aP97445 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.42□□□□□ -0.1
Cacna1aP97445 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cacna1aP97445 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Cacna1aP97445 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Cacna1aP97445 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.42□□□□□ -0.1
Cacna1aP97445 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.42□□□□□ -0.1
Cacna1aP97445 Gm27437-201ENSMUST00000183429 107 ntBASIC14.42□□□□□ -0.1
Cacna1aP97445 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cacna1aP97445 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cacna1aP97445 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Cacna1aP97445 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cacna1aP97445 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 Mir449b-201ENSMUST00000104833 80 ntBASIC14.41□□□□□ -0.1
Cacna1aP97445 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.41□□□□□ -0.1
Cacna1aP97445 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cacna1aP97445 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Cacna1aP97445 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cacna1aP97445 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.41□□□□□ -0.1
Cacna1aP97445 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 Gm27622-201ENSMUST00000183779 60 ntBASIC14.41□□□□□ -0.1
Cacna1aP97445 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.41□□□□□ -0.1
Cacna1aP97445 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.41□□□□□ -0.1
Cacna1aP97445 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Cacna1aP97445 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cacna1aP97445 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cacna1aP97445 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cacna1aP97445 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Cacna1aP97445 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1aP97445 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.4□□□□□ -0.1
Cacna1aP97445 Thap2-203ENSMUST00000218989 527 ntBASIC14.4□□□□□ -0.1
Cacna1aP97445 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.4□□□□□ -0.1
Cacna1aP97445 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1aP97445 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cacna1aP97445 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1aP97445 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cacna1aP97445 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cacna1aP97445 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1aP97445 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1aP97445 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1aP97445 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1aP97445 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1aP97445 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1aP97445 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.4□□□□□ -0.1
Cacna1aP97445 Rprl2-201ENSMUST00000157150 290 ntBASIC14.4□□□□□ -0.1
Cacna1aP97445 Mir6420-201ENSMUST00000185032 102 ntBASIC14.4□□□□□ -0.1
Cacna1aP97445 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cacna1aP97445 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.4□□□□□ -0.1
Cacna1aP97445 Gm6007-201ENSMUST00000208170 823 ntBASIC14.4□□□□□ -0.1
Cacna1aP97445 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cacna1aP97445 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Cacna1aP97445 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cacna1aP97445 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cacna1aP97445 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.39□□□□□ -0.11
Cacna1aP97445 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.39□□□□□ -0.11
Cacna1aP97445 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.39□□□□□ -0.11
Cacna1aP97445 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Rarb-207ENSMUST00000225921 2756 ntBASIC14.39□□□□□ -0.11
Cacna1aP97445 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms