Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.05□□□□□ -0.32
Pdlim4P70271 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim4P70271 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.05□□□□□ -0.32
Pdlim4P70271 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Pdlim4P70271 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pdlim4P70271 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim4P70271 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim4P70271 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.05□□□□□ -0.32
Pdlim4P70271 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim4P70271 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim4P70271 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim4P70271 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim4P70271 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pdlim4P70271 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Pdlim4P70271 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Gm12644-201ENSMUST00000119935 606 ntBASIC13.04□□□□□ -0.32
Pdlim4P70271 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pdlim4P70271 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.04□□□□□ -0.32
Pdlim4P70271 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pdlim4P70271 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pdlim4P70271 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Pdlim4P70271 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.04□□□□□ -0.32
Pdlim4P70271 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pdlim4P70271 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.04□□□□□ -0.32
Pdlim4P70271 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdlim4P70271 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.03□□□□□ -0.32
Pdlim4P70271 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.03□□□□□ -0.32
Pdlim4P70271 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.03□□□□□ -0.32
Pdlim4P70271 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.03□□□□□ -0.32
Pdlim4P70271 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Pdlim4P70271 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim4P70271 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim4P70271 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim4P70271 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.02□□□□□ -0.32
Pdlim4P70271 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim4P70271 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.02□□□□□ -0.32
Pdlim4P70271 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.02□□□□□ -0.33
Pdlim4P70271 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.02□□□□□ -0.33
Pdlim4P70271 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 Gm25745-201ENSMUST00000174945 133 ntBASIC13.02□□□□□ -0.33
Pdlim4P70271 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Pdlim4P70271 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.02□□□□□ -0.33
Pdlim4P70271 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pdlim4P70271 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pdlim4P70271 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Pdlim4P70271 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pdlim4P70271 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pdlim4P70271 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pdlim4P70271 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim4P70271 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms