Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm3P62311 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm3P62311 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.36□□□□□ -0.11
Lsm3P62311 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm3P62311 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm3P62311 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm3P62311 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Lsm3P62311 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.36□□□□□ -0.11
Lsm3P62311 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm3P62311 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.36□□□□□ -0.11
Lsm3P62311 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Lsm3P62311 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lsm3P62311 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lsm3P62311 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm3P62311 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm3P62311 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm3P62311 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Lsm3P62311 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.35□□□□□ -0.11
Lsm3P62311 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lsm3P62311 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.35□□□□□ -0.11
Lsm3P62311 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.35□□□□□ -0.11
Lsm3P62311 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.35□□□□□ -0.11
Lsm3P62311 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lsm3P62311 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Lsm3P62311 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Lsm3P62311 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm3P62311 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lsm3P62311 Gm9731-201ENSMUST00000209480 747 ntBASIC14.34□□□□□ -0.11
Lsm3P62311 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Lsm3P62311 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lsm3P62311 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Lsm3P62311 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lsm3P62311 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Lsm3P62311 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lsm3P62311 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.34□□□□□ -0.11
Lsm3P62311 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm3P62311 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lsm3P62311 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Lsm3P62311 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lsm3P62311 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Lsm3P62311 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Lsm3P62311 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms