Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm18889-201ENSMUST00000174284 929 ntBASIC21.09■□□□□ 0.97
Nphp4P59240 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 Gm43125-201ENSMUST00000201724 730 ntBASIC21.09■□□□□ 0.97
Nphp4P59240 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nphp4P59240 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Nphp4P59240 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nphp4P59240 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nphp4P59240 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Nphp4P59240 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nphp4P59240 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nphp4P59240 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nphp4P59240 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nphp4P59240 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nphp4P59240 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nphp4P59240 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC21.08■□□□□ 0.97
Nphp4P59240 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Nphp4P59240 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC21.08■□□□□ 0.97
Nphp4P59240 Gm5312-201ENSMUST00000203728 547 ntBASIC21.08■□□□□ 0.97
Nphp4P59240 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC21.08■□□□□ 0.97
Nphp4P59240 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nphp4P59240 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Nphp4P59240 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nphp4P59240 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nphp4P59240 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nphp4P59240 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nphp4P59240 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC21.07■□□□□ 0.96
Nphp4P59240 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Nphp4P59240 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Nphp4P59240 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Auts2-212ENSMUST00000178555 309 ntBASIC21.07■□□□□ 0.96
Nphp4P59240 Gm43474-201ENSMUST00000196415 774 ntBASIC21.07■□□□□ 0.96
Nphp4P59240 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC21.07■□□□□ 0.96
Nphp4P59240 CT030684.1-201ENSMUST00000227292 914 ntBASIC21.07■□□□□ 0.96
Nphp4P59240 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Nphp4P59240 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Nphp4P59240 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Nphp4P59240 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nphp4P59240 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Nphp4P59240 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC21.06■□□□□ 0.96
Nphp4P59240 Nudt18-203ENSMUST00000228768 1578 ntBASIC21.06■□□□□ 0.96
Nphp4P59240 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nphp4P59240 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nphp4P59240 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nphp4P59240 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Nphp4P59240 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nphp4P59240 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC21.06■□□□□ 0.96
Nphp4P59240 Gm20628-201ENSMUST00000177363 3215 ntBASIC21.06■□□□□ 0.96
Nphp4P59240 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nphp4P59240 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
Nphp4P59240 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC21.05■□□□□ 0.96
Nphp4P59240 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC21.05■□□□□ 0.96
Nphp4P59240 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Nphp4P59240 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC21.05■□□□□ 0.96
Nphp4P59240 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nphp4P59240 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Nphp4P59240 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC21.05■□□□□ 0.96
Nphp4P59240 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Nphp4P59240 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nphp4P59240 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nphp4P59240 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nphp4P59240 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nphp4P59240 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nphp4P59240 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nphp4P59240 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nphp4P59240 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC21.04■□□□□ 0.96
Nphp4P59240 Gm37171-201ENSMUST00000192636 1185 ntBASIC21.04■□□□□ 0.96
Nphp4P59240 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC21.04■□□□□ 0.96
Nphp4P59240 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nphp4P59240 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Nphp4P59240 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nphp4P59240 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC21.04■□□□□ 0.96
Nphp4P59240 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nphp4P59240 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nphp4P59240 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms