Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NcanP55066 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.42■□□□□ 0.22
NcanP55066 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.42■□□□□ 0.22
NcanP55066 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NcanP55066 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NcanP55066 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
NcanP55066 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.42■□□□□ 0.22
NcanP55066 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.42■□□□□ 0.22
NcanP55066 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.42■□□□□ 0.22
NcanP55066 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.42■□□□□ 0.22
NcanP55066 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NcanP55066 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
NcanP55066 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NcanP55066 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.42■□□□□ 0.22
NcanP55066 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.42■□□□□ 0.22
NcanP55066 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.42■□□□□ 0.22
NcanP55066 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NcanP55066 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
NcanP55066 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NcanP55066 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NcanP55066 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NcanP55066 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NcanP55066 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NcanP55066 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
NcanP55066 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NcanP55066 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NcanP55066 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NcanP55066 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NcanP55066 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.41■□□□□ 0.22
NcanP55066 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NcanP55066 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
NcanP55066 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NcanP55066 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NcanP55066 Gm10499-201ENSMUST00000174094 934 ntBASIC16.41■□□□□ 0.22
NcanP55066 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.41■□□□□ 0.22
NcanP55066 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.41■□□□□ 0.22
NcanP55066 Gm6266-201ENSMUST00000203844 806 ntBASIC16.41■□□□□ 0.22
NcanP55066 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NcanP55066 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NcanP55066 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NcanP55066 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NcanP55066 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NcanP55066 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
NcanP55066 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NcanP55066 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NcanP55066 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NcanP55066 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.41■□□□□ 0.22
NcanP55066 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NcanP55066 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NcanP55066 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NcanP55066 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NcanP55066 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NcanP55066 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NcanP55066 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.4■□□□□ 0.22
NcanP55066 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.4■□□□□ 0.22
NcanP55066 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NcanP55066 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NcanP55066 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NcanP55066 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
NcanP55066 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.4■□□□□ 0.22
NcanP55066 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.4■□□□□ 0.22
NcanP55066 Gm7775-201ENSMUST00000218871 853 ntBASIC16.4■□□□□ 0.22
NcanP55066 Gm6218-201ENSMUST00000219812 628 ntBASIC16.4■□□□□ 0.22
NcanP55066 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NcanP55066 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NcanP55066 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NcanP55066 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NcanP55066 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NcanP55066 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NcanP55066 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NcanP55066 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NcanP55066 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NcanP55066 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NcanP55066 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.4■□□□□ 0.22
NcanP55066 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.22
NcanP55066 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NcanP55066 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NcanP55066 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NcanP55066 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.39■□□□□ 0.21
NcanP55066 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NcanP55066 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NcanP55066 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NcanP55066 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.39■□□□□ 0.21
NcanP55066 Gm12859-201ENSMUST00000117834 427 ntBASIC16.39■□□□□ 0.21
NcanP55066 Gm12138-201ENSMUST00000122180 951 ntBASIC16.39■□□□□ 0.21
NcanP55066 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NcanP55066 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NcanP55066 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.39■□□□□ 0.21
NcanP55066 Gm8318-201ENSMUST00000182954 872 ntBASIC16.39■□□□□ 0.21
NcanP55066 Gm38225-201ENSMUST00000194001 393 ntBASIC16.39■□□□□ 0.21
NcanP55066 Gm6745-201ENSMUST00000199216 526 ntBASIC16.39■□□□□ 0.21
NcanP55066 Gm45331-201ENSMUST00000209868 554 ntBASIC16.39■□□□□ 0.21
NcanP55066 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NcanP55066 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NcanP55066 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NcanP55066 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NcanP55066 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NcanP55066 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NcanP55066 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NcanP55066 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms