Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.13■□□□□ 0.33
Sox5P35710 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox5P35710 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox5P35710 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sox5P35710 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox5P35710 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox5P35710 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox5P35710 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox5P35710 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox5P35710 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox5P35710 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox5P35710 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox5P35710 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox5P35710 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.12■□□□□ 0.33
Sox5P35710 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox5P35710 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Sox5P35710 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox5P35710 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox5P35710 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sox5P35710 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox5P35710 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sox5P35710 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox5P35710 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox5P35710 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox5P35710 Gm7367-201ENSMUST00000057611 492 ntBASIC17.11■□□□□ 0.33
Sox5P35710 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sox5P35710 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox5P35710 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox5P35710 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sox5P35710 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox5P35710 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.11■□□□□ 0.33
Sox5P35710 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sox5P35710 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox5P35710 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox5P35710 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox5P35710 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sox5P35710 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.1■□□□□ 0.33
Sox5P35710 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.1■□□□□ 0.33
Sox5P35710 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.1■□□□□ 0.33
Sox5P35710 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sox5P35710 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Sox5P35710 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sox5P35710 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox5P35710 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Sox5P35710 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Sox5P35710 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox5P35710 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.09■□□□□ 0.33
Sox5P35710 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sox5P35710 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox5P35710 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox5P35710 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.09■□□□□ 0.33
Sox5P35710 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox5P35710 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Sox5P35710 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox5P35710 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox5P35710 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sox5P35710 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox5P35710 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sox5P35710 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.09■□□□□ 0.33
Sox5P35710 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox5P35710 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox5P35710 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Sox5P35710 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sox5P35710 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sox5P35710 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox5P35710 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox5P35710 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox5P35710 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox5P35710 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox5P35710 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox5P35710 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.08■□□□□ 0.32
Sox5P35710 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox5P35710 Gm6623-201ENSMUST00000173570 544 ntBASIC17.08■□□□□ 0.32
Sox5P35710 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox5P35710 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox5P35710 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox5P35710 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox5P35710 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox5P35710 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox5P35710 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Sox5P35710 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sox5P35710 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms