Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Foxa1P35582 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxa1P35582 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxa1P35582 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxa1P35582 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxa1P35582 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxa1P35582 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxa1P35582 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxa1P35582 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxa1P35582 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Foxa1P35582 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Foxa1P35582 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxa1P35582 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Foxa1P35582 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Foxa1P35582 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Foxa1P35582 Gm44357-201ENSMUST00000195897 142 ntBASIC14.49□□□□□ -0.09
Foxa1P35582 Gm19658-201ENSMUST00000196231 138 ntBASIC14.49□□□□□ -0.09
Foxa1P35582 Gm44367-201ENSMUST00000196836 138 ntBASIC14.49□□□□□ -0.09
Foxa1P35582 Gm44350-201ENSMUST00000197197 138 ntBASIC14.49□□□□□ -0.09
Foxa1P35582 Gm44390-201ENSMUST00000197533 144 ntBASIC14.49□□□□□ -0.09
Foxa1P35582 Gm44313-201ENSMUST00000198018 138 ntBASIC14.49□□□□□ -0.09
Foxa1P35582 Gm44486-201ENSMUST00000198508 138 ntBASIC14.49□□□□□ -0.09
Foxa1P35582 Gm44314-201ENSMUST00000199263 138 ntBASIC14.49□□□□□ -0.09
Foxa1P35582 Gm44394-201ENSMUST00000199558 138 ntBASIC14.49□□□□□ -0.09
Foxa1P35582 Gm44484-201ENSMUST00000199873 138 ntBASIC14.49□□□□□ -0.09
Foxa1P35582 Gm44466-201ENSMUST00000200264 138 ntBASIC14.49□□□□□ -0.09
Foxa1P35582 Gm44359-201ENSMUST00000200671 138 ntBASIC14.49□□□□□ -0.09
Foxa1P35582 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxa1P35582 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxa1P35582 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Foxa1P35582 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Foxa1P35582 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.49□□□□□ -0.09
Foxa1P35582 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxa1P35582 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.48□□□□□ -0.09
Foxa1P35582 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.48□□□□□ -0.09
Foxa1P35582 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.48□□□□□ -0.09
Foxa1P35582 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.48□□□□□ -0.09
Foxa1P35582 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.48□□□□□ -0.09
Foxa1P35582 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Foxa1P35582 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxa1P35582 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.47□□□□□ -0.09
Foxa1P35582 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Foxa1P35582 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxa1P35582 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxa1P35582 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Foxa1P35582 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxa1P35582 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.47□□□□□ -0.09
Foxa1P35582 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.47□□□□□ -0.09
Foxa1P35582 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxa1P35582 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Foxa1P35582 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Foxa1P35582 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxa1P35582 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.47□□□□□ -0.09
Foxa1P35582 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.47□□□□□ -0.09
Foxa1P35582 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.47□□□□□ -0.09
Foxa1P35582 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Foxa1P35582 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.47□□□□□ -0.09
Foxa1P35582 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Foxa1P35582 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxa1P35582 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxa1P35582 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxa1P35582 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Foxa1P35582 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxa1P35582 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.47□□□□□ -0.09
Foxa1P35582 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Foxa1P35582 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxa1P35582 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxa1P35582 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxa1P35582 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Foxa1P35582 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxa1P35582 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Foxa1P35582 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxa1P35582 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxa1P35582 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxa1P35582 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxa1P35582 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.46□□□□□ -0.09
Foxa1P35582 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Foxa1P35582 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Foxa1P35582 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.46□□□□□ -0.09
Foxa1P35582 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.46□□□□□ -0.09
Foxa1P35582 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxa1P35582 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.46□□□□□ -0.09
Foxa1P35582 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms