Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.44□□□□□ -0.1
Sftpa1P35242 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sftpa1P35242 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.44□□□□□ -0.1
Sftpa1P35242 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sftpa1P35242 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sftpa1P35242 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sftpa1P35242 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sftpa1P35242 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sftpa1P35242 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sftpa1P35242 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sftpa1P35242 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.43□□□□□ -0.1
Sftpa1P35242 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sftpa1P35242 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Sftpa1P35242 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.43□□□□□ -0.1
Sftpa1P35242 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Sftpa1P35242 Mir449b-201ENSMUST00000104833 80 ntBASIC14.43□□□□□ -0.1
Sftpa1P35242 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Sftpa1P35242 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sftpa1P35242 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sftpa1P35242 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sftpa1P35242 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.43□□□□□ -0.1
Sftpa1P35242 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.43□□□□□ -0.1
Sftpa1P35242 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.43□□□□□ -0.1
Sftpa1P35242 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.43□□□□□ -0.1
Sftpa1P35242 Gm18246-201ENSMUST00000221023 728 ntBASIC14.43□□□□□ -0.1
Sftpa1P35242 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sftpa1P35242 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sftpa1P35242 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sftpa1P35242 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sftpa1P35242 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sftpa1P35242 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.43□□□□□ -0.1
Sftpa1P35242 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.43□□□□□ -0.1
Sftpa1P35242 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sftpa1P35242 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sftpa1P35242 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Sftpa1P35242 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.42□□□□□ -0.1
Sftpa1P35242 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.42□□□□□ -0.1
Sftpa1P35242 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.42□□□□□ -0.1
Sftpa1P35242 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sftpa1P35242 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.42□□□□□ -0.1
Sftpa1P35242 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.42□□□□□ -0.1
Sftpa1P35242 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.42□□□□□ -0.1
Sftpa1P35242 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.42□□□□□ -0.1
Sftpa1P35242 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.42□□□□□ -0.1
Sftpa1P35242 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.42□□□□□ -0.1
Sftpa1P35242 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.42□□□□□ -0.1
Sftpa1P35242 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.42□□□□□ -0.1
Sftpa1P35242 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Sftpa1P35242 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.42□□□□□ -0.1
Sftpa1P35242 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sftpa1P35242 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sftpa1P35242 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sftpa1P35242 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sftpa1P35242 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sftpa1P35242 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sftpa1P35242 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sftpa1P35242 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.41□□□□□ -0.1
Sftpa1P35242 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sftpa1P35242 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sftpa1P35242 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sftpa1P35242 Gm9385-201ENSMUST00000117563 472 ntBASIC14.41□□□□□ -0.1
Sftpa1P35242 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.41□□□□□ -0.1
Sftpa1P35242 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sftpa1P35242 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.41□□□□□ -0.1
Sftpa1P35242 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.41□□□□□ -0.1
Sftpa1P35242 Gm43438-201ENSMUST00000198133 379 ntBASIC14.41□□□□□ -0.1
Sftpa1P35242 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.41□□□□□ -0.1
Sftpa1P35242 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms