Protein–RNA interactions for Protein: P15533

Trim30a, Tripartite motif-containing protein 30A, mousemouse

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30aP15533 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30aP15533 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30aP15533 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.28■□□□□ 0.36
Trim30aP15533 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim30aP15533 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Trim30aP15533 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30aP15533 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30aP15533 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Trim30aP15533 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trim30aP15533 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30aP15533 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30aP15533 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30aP15533 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim30aP15533 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim30aP15533 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30aP15533 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30aP15533 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Trim30aP15533 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30aP15533 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30aP15533 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.27■□□□□ 0.36
Trim30aP15533 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30aP15533 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30aP15533 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30aP15533 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30aP15533 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30aP15533 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim30aP15533 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim30aP15533 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim30aP15533 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim30aP15533 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim30aP15533 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim30aP15533 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim30aP15533 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim30aP15533 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim30aP15533 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.26■□□□□ 0.35
Trim30aP15533 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Efs-202ENSMUST00000227037 2540 ntBASIC17.26■□□□□ 0.35
Trim30aP15533 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim30aP15533 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim30aP15533 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30aP15533 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.26■□□□□ 0.35
Trim30aP15533 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim30aP15533 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim30aP15533 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim30aP15533 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim30aP15533 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Gm6211-202ENSMUST00000167849 925 ntBASIC17.25■□□□□ 0.35
Trim30aP15533 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim30aP15533 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trim30aP15533 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30aP15533 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim30aP15533 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim30aP15533 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim30aP15533 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim30aP15533 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim30aP15533 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim30aP15533 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim30aP15533 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim30aP15533 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim30aP15533 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms