Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RaraP11416 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RaraP11416 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RaraP11416 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RaraP11416 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.96■□□□□ 0.31
RaraP11416 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RaraP11416 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.96■□□□□ 0.31
RaraP11416 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RaraP11416 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RaraP11416 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RaraP11416 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RaraP11416 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RaraP11416 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.96■□□□□ 0.31
RaraP11416 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.96■□□□□ 0.31
RaraP11416 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.96■□□□□ 0.31
RaraP11416 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.96■□□□□ 0.31
RaraP11416 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RaraP11416 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RaraP11416 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RaraP11416 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.96■□□□□ 0.31
RaraP11416 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RaraP11416 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RaraP11416 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RaraP11416 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RaraP11416 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.96■□□□□ 0.31
RaraP11416 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RaraP11416 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RaraP11416 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.96■□□□□ 0.31
RaraP11416 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RaraP11416 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RaraP11416 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
RaraP11416 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RaraP11416 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RaraP11416 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
RaraP11416 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.95■□□□□ 0.3
RaraP11416 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.95■□□□□ 0.3
RaraP11416 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.95■□□□□ 0.3
RaraP11416 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.95■□□□□ 0.3
RaraP11416 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.95■□□□□ 0.3
RaraP11416 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
RaraP11416 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RaraP11416 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RaraP11416 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.94■□□□□ 0.3
RaraP11416 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RaraP11416 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RaraP11416 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RaraP11416 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.93■□□□□ 0.3
RaraP11416 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RaraP11416 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RaraP11416 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RaraP11416 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RaraP11416 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RaraP11416 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.93■□□□□ 0.3
RaraP11416 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RaraP11416 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.93■□□□□ 0.3
RaraP11416 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RaraP11416 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RaraP11416 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RaraP11416 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RaraP11416 Gm7367-201ENSMUST00000057611 492 ntBASIC16.93■□□□□ 0.3
RaraP11416 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RaraP11416 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RaraP11416 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RaraP11416 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms