Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Gm12008-201ENSMUST00000117791 755 ntBASIC13.8□□□□□ -0.2
Ccl3P10855 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Gm18889-201ENSMUST00000174284 929 ntBASIC13.8□□□□□ -0.2
Ccl3P10855 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Gm43474-201ENSMUST00000196415 774 ntBASIC13.8□□□□□ -0.2
Ccl3P10855 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.8□□□□□ -0.2
Ccl3P10855 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.8□□□□□ -0.2
Ccl3P10855 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.8□□□□□ -0.2
Ccl3P10855 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccl3P10855 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccl3P10855 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccl3P10855 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccl3P10855 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccl3P10855 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccl3P10855 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccl3P10855 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccl3P10855 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl3P10855 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl3P10855 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl3P10855 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl3P10855 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccl3P10855 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.79□□□□□ -0.2
Ccl3P10855 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccl3P10855 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ccl3P10855 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.79□□□□□ -0.2
Ccl3P10855 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccl3P10855 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl3P10855 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl3P10855 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl3P10855 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl3P10855 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl3P10855 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl3P10855 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl3P10855 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl3P10855 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccl3P10855 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccl3P10855 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.78□□□□□ -0.2
Ccl3P10855 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.78□□□□□ -0.2
Ccl3P10855 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.78□□□□□ -0.2
Ccl3P10855 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccl3P10855 Rpph1-201ENSMUST00000175096 319 ntBASIC13.78□□□□□ -0.2
Ccl3P10855 Gm25948-201ENSMUST00000175334 112 ntBASIC13.78□□□□□ -0.2
Ccl3P10855 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccl3P10855 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccl3P10855 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.78□□□□□ -0.2
Ccl3P10855 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccl3P10855 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccl3P10855 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccl3P10855 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl3P10855 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccl3P10855 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ccl3P10855 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Ccl3P10855 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl3P10855 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl3P10855 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl3P10855 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl3P10855 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.77□□□□□ -0.21
Ccl3P10855 Gm9385-201ENSMUST00000117563 472 ntBASIC13.77□□□□□ -0.21
Ccl3P10855 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.77□□□□□ -0.21
Ccl3P10855 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl3P10855 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccl3P10855 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl3P10855 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl3P10855 Gm43125-201ENSMUST00000201724 730 ntBASIC13.77□□□□□ -0.21
Ccl3P10855 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.77□□□□□ -0.21
Ccl3P10855 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccl3P10855 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.77□□□□□ -0.21
Ccl3P10855 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl3P10855 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms