Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ly6c1P0CW02 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ly6c1P0CW02 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ly6c1P0CW02 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ly6c1P0CW02 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ly6c1P0CW02 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ly6c1P0CW02 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ly6c1P0CW02 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ly6c1P0CW02 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Gm7230-201ENSMUST00000173026 815 ntBASIC13.08□□□□□ -0.32
Ly6c1P0CW02 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ly6c1P0CW02 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.08□□□□□ -0.32
Ly6c1P0CW02 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Gm8344-201ENSMUST00000119813 856 ntBASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Gm2651-201ENSMUST00000203560 838 ntBASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ly6c1P0CW02 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Gm19164-201ENSMUST00000210667 640 ntBASIC13.06□□□□□ -0.32
Ly6c1P0CW02 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.06□□□□□ -0.32
Ly6c1P0CW02 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Gm18515-201ENSMUST00000219755 797 ntBASIC13.06□□□□□ -0.32
Ly6c1P0CW02 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms