Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc9P09633 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc9P09633 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Hoxc9P09633 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC20.22■□□□□ 0.83
Hoxc9P09633 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc9P09633 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc9P09633 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC20.22■□□□□ 0.83
Hoxc9P09633 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC20.22■□□□□ 0.83
Hoxc9P09633 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC20.22■□□□□ 0.83
Hoxc9P09633 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc9P09633 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.22■□□□□ 0.83
Hoxc9P09633 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc9P09633 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Hoxc9P09633 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Hoxc9P09633 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc9P09633 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc9P09633 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.21■□□□□ 0.83
Hoxc9P09633 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hoxc9P09633 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc9P09633 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc9P09633 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc9P09633 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Hoxc9P09633 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC20.21■□□□□ 0.83
Hoxc9P09633 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc9P09633 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC20.21■□□□□ 0.83
Hoxc9P09633 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC20.21■□□□□ 0.83
Hoxc9P09633 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC20.21■□□□□ 0.83
Hoxc9P09633 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc9P09633 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc9P09633 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc9P09633 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc9P09633 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc9P09633 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc9P09633 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc9P09633 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc9P09633 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc9P09633 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc9P09633 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc9P09633 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc9P09633 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc9P09633 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc9P09633 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc9P09633 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc9P09633 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC20.2■□□□□ 0.82
Hoxc9P09633 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc9P09633 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC20.2■□□□□ 0.82
Hoxc9P09633 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc9P09633 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc9P09633 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Hoxc9P09633 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc9P09633 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.2■□□□□ 0.82
Hoxc9P09633 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc9P09633 Fgf17-202ENSMUST00000227123 1336 ntBASIC20.2■□□□□ 0.82
Hoxc9P09633 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc9P09633 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Hoxc9P09633 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Hoxc9P09633 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC20.2■□□□□ 0.82
Hoxc9P09633 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc9P09633 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc9P09633 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc9P09633 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Hoxc9P09633 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Hoxc9P09633 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.19■□□□□ 0.82
Hoxc9P09633 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Hoxc9P09633 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
Hoxc9P09633 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Hoxc9P09633 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc9P09633 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc9P09633 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc9P09633 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc9P09633 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc9P09633 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC20.19■□□□□ 0.82
Hoxc9P09633 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc9P09633 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC20.19■□□□□ 0.82
Hoxc9P09633 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc9P09633 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC20.19■□□□□ 0.82
Hoxc9P09633 Gm10154-201ENSMUST00000084445 354 ntBASIC20.19■□□□□ 0.82
Hoxc9P09633 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Hoxc9P09633 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc9P09633 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc9P09633 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc9P09633 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc9P09633 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc9P09633 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc9P09633 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.18■□□□□ 0.82
Hoxc9P09633 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc9P09633 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc9P09633 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc9P09633 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc9P09633 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc9P09633 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC20.18■□□□□ 0.82
Hoxc9P09633 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Hoxc9P09633 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC20.18■□□□□ 0.82
Hoxc9P09633 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc9P09633 Gm18057-201ENSMUST00000208220 503 ntBASIC20.18■□□□□ 0.82
Hoxc9P09633 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc9P09633 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc9P09633 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc9P09633 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Hoxc9P09633 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms