Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tuba1bP05213 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tuba1bP05213 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tuba1bP05213 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tuba1bP05213 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tuba1bP05213 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Tuba1bP05213 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.59□□□□□ -0.07
Tuba1bP05213 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Tuba1bP05213 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Tuba1bP05213 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Gm6659-201ENSMUST00000174752 547 ntBASIC14.59□□□□□ -0.07
Tuba1bP05213 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.59□□□□□ -0.07
Tuba1bP05213 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.59□□□□□ -0.07
Tuba1bP05213 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Tuba1bP05213 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Tuba1bP05213 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tuba1bP05213 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tuba1bP05213 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tuba1bP05213 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Tuba1bP05213 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.58□□□□□ -0.07
Tuba1bP05213 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Tuba1bP05213 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.58□□□□□ -0.08
Tuba1bP05213 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.58□□□□□ -0.08
Tuba1bP05213 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Gm23634-201ENSMUST00000175071 91 ntBASIC14.58□□□□□ -0.08
Tuba1bP05213 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Tuba1bP05213 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Tuba1bP05213 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Tuba1bP05213 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tuba1bP05213 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tuba1bP05213 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tuba1bP05213 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tuba1bP05213 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
Tuba1bP05213 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Tuba1bP05213 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tuba1bP05213 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tuba1bP05213 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tuba1bP05213 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tuba1bP05213 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tuba1bP05213 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tuba1bP05213 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.57□□□□□ -0.08
Tuba1bP05213 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tuba1bP05213 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tuba1bP05213 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tuba1bP05213 Phf7-203ENSMUST00000226565 1971 ntBASIC14.57□□□□□ -0.08
Tuba1bP05213 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Tuba1bP05213 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tuba1bP05213 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Tuba1bP05213 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tuba1bP05213 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tuba1bP05213 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.57□□□□□ -0.08
Tuba1bP05213 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Tuba1bP05213 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms