Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CfdP03953 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CfdP03953 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.12□□□□□ -0.31
CfdP03953 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CfdP03953 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.12□□□□□ -0.31
CfdP03953 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.12□□□□□ -0.31
CfdP03953 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.12□□□□□ -0.31
CfdP03953 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CfdP03953 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.12□□□□□ -0.31
CfdP03953 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CfdP03953 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CfdP03953 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Mir1199-201ENSMUST00000117015 119 ntBASIC13.11□□□□□ -0.31
CfdP03953 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.11□□□□□ -0.31
CfdP03953 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.11□□□□□ -0.31
CfdP03953 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CfdP03953 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.11□□□□□ -0.31
CfdP03953 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.11□□□□□ -0.31
CfdP03953 Gm3375-201ENSMUST00000203929 796 ntBASIC13.11□□□□□ -0.31
CfdP03953 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CfdP03953 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CfdP03953 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.11□□□□□ -0.31
CfdP03953 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CfdP03953 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CfdP03953 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CfdP03953 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.1□□□□□ -0.31
CfdP03953 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CfdP03953 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CfdP03953 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CfdP03953 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CfdP03953 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CfdP03953 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CfdP03953 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CfdP03953 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CfdP03953 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.1□□□□□ -0.31
CfdP03953 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.1□□□□□ -0.31
CfdP03953 Odf3b-204ENSMUST00000227834 930 ntBASIC13.1□□□□□ -0.31
CfdP03953 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CfdP03953 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CfdP03953 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.1□□□□□ -0.31
CfdP03953 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CfdP03953 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CfdP03953 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CfdP03953 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CfdP03953 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CfdP03953 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CfdP03953 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CfdP03953 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CfdP03953 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.09□□□□□ -0.31
CfdP03953 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CfdP03953 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.09□□□□□ -0.31
CfdP03953 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.09□□□□□ -0.31
CfdP03953 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CfdP03953 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CfdP03953 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CfdP03953 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CfdP03953 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.09□□□□□ -0.31
CfdP03953 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CfdP03953 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CfdP03953 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CfdP03953 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CfdP03953 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CfdP03953 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CfdP03953 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CfdP03953 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CfdP03953 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
CfdP03953 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CfdP03953 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CfdP03953 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.08□□□□□ -0.31
CfdP03953 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CfdP03953 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CfdP03953 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CfdP03953 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.08□□□□□ -0.32
CfdP03953 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CfdP03953 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
CfdP03953 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.08□□□□□ -0.32
CfdP03953 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.08□□□□□ -0.32
CfdP03953 Gm10566-201ENSMUST00000086739 996 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms