Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cops6O88545 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.07■□□□□ 0.64
Cops6O88545 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Gm8318-201ENSMUST00000182954 872 ntBASIC19.07■□□□□ 0.64
Cops6O88545 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.07■□□□□ 0.64
Cops6O88545 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.07■□□□□ 0.64
Cops6O88545 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.07■□□□□ 0.64
Cops6O88545 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops6O88545 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.07■□□□□ 0.64
Cops6O88545 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Cops6O88545 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Cops6O88545 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.06■□□□□ 0.64
Cops6O88545 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Cops6O88545 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Gm27301-201ENSMUST00000184012 127 ntBASIC19.06■□□□□ 0.64
Cops6O88545 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.06■□□□□ 0.64
Cops6O88545 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Cops6O88545 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.06■□□□□ 0.64
Cops6O88545 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.06■□□□□ 0.64
Cops6O88545 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops6O88545 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cops6O88545 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cops6O88545 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cops6O88545 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cops6O88545 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cops6O88545 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cops6O88545 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cops6O88545 Gm15427-201ENSMUST00000117288 531 ntBASIC19.05■□□□□ 0.64
Cops6O88545 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.05■□□□□ 0.64
Cops6O88545 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.05■□□□□ 0.64
Cops6O88545 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cops6O88545 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.05■□□□□ 0.64
Cops6O88545 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cops6O88545 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cops6O88545 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cops6O88545 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.04■□□□□ 0.64
Cops6O88545 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Gm14722-201ENSMUST00000118943 689 ntBASIC19.04■□□□□ 0.64
Cops6O88545 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.04■□□□□ 0.64
Cops6O88545 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cops6O88545 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cops6O88545 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.04■□□□□ 0.64
Cops6O88545 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops6O88545 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops6O88545 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops6O88545 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops6O88545 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms