Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf17O88472 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf17O88472 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Tnfrsf17O88472 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf17O88472 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf17O88472 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf17O88472 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf17O88472 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf17O88472 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Tnfrsf17O88472 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf17O88472 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf17O88472 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf17O88472 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf17O88472 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Tnfrsf17O88472 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf17O88472 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.52□□□□□ -0.09
Tnfrsf17O88472 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.52□□□□□ -0.09
Tnfrsf17O88472 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf17O88472 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf17O88472 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.52□□□□□ -0.09
Tnfrsf17O88472 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf17O88472 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf17O88472 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf17O88472 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.52□□□□□ -0.09
Tnfrsf17O88472 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf17O88472 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf17O88472 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.51□□□□□ -0.09
Tnfrsf17O88472 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Tnfrsf17O88472 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Gm13453-201ENSMUST00000118708 357 ntBASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
Tnfrsf17O88472 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf17O88472 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf17O88472 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfrsf17O88472 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms