Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm20553-201ENSMUST00000204205 844 ntBASIC14.04□□□□□ -0.16
Col5a1O88207 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col5a1O88207 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.04□□□□□ -0.16
Col5a1O88207 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.04□□□□□ -0.16
Col5a1O88207 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.04□□□□□ -0.16
Col5a1O88207 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.04□□□□□ -0.16
Col5a1O88207 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Col5a1O88207 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col5a1O88207 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col5a1O88207 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col5a1O88207 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.04□□□□□ -0.16
Col5a1O88207 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.04□□□□□ -0.16
Col5a1O88207 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.04□□□□□ -0.16
Col5a1O88207 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col5a1O88207 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col5a1O88207 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col5a1O88207 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col5a1O88207 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col5a1O88207 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col5a1O88207 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col5a1O88207 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col5a1O88207 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col5a1O88207 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col5a1O88207 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col5a1O88207 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col5a1O88207 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col5a1O88207 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Col5a1O88207 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col5a1O88207 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.03□□□□□ -0.16
Col5a1O88207 Gm38294-201ENSMUST00000192831 381 ntBASIC14.03□□□□□ -0.16
Col5a1O88207 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.03□□□□□ -0.16
Col5a1O88207 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.03□□□□□ -0.16
Col5a1O88207 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.03□□□□□ -0.16
Col5a1O88207 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col5a1O88207 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col5a1O88207 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col5a1O88207 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col5a1O88207 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col5a1O88207 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col5a1O88207 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col5a1O88207 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Col5a1O88207 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col5a1O88207 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col5a1O88207 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col5a1O88207 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col5a1O88207 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.02□□□□□ -0.16
Col5a1O88207 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col5a1O88207 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Col5a1O88207 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col5a1O88207 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.02□□□□□ -0.16
Col5a1O88207 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Col5a1O88207 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col5a1O88207 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col5a1O88207 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col5a1O88207 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col5a1O88207 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col5a1O88207 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Col5a1O88207 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.02□□□□□ -0.16
Col5a1O88207 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Col5a1O88207 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col5a1O88207 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col5a1O88207 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col5a1O88207 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col5a1O88207 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col5a1O88207 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col5a1O88207 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Col5a1O88207 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col5a1O88207 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col5a1O88207 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col5a1O88207 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col5a1O88207 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col5a1O88207 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.01□□□□□ -0.17
Col5a1O88207 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col5a1O88207 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col5a1O88207 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.01□□□□□ -0.17
Col5a1O88207 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.01□□□□□ -0.17
Col5a1O88207 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col5a1O88207 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.01□□□□□ -0.17
Col5a1O88207 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col5a1O88207 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col5a1O88207 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.01□□□□□ -0.17
Col5a1O88207 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col5a1O88207 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.01□□□□□ -0.17
Col5a1O88207 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.01□□□□□ -0.17
Col5a1O88207 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.01□□□□□ -0.17
Col5a1O88207 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col5a1O88207 Gm8318-201ENSMUST00000182954 872 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms