Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
Ttc3O88196 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ttc3O88196 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ttc3O88196 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ttc3O88196 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ttc3O88196 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ttc3O88196 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ttc3O88196 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.32■□□□□ 0.2
Ttc3O88196 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc3O88196 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.32■□□□□ 0.2
Ttc3O88196 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc3O88196 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc3O88196 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc3O88196 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc3O88196 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ttc3O88196 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc3O88196 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Ttc3O88196 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.32■□□□□ 0.2
Ttc3O88196 Gm11025-201ENSMUST00000140773 466 ntBASIC16.32■□□□□ 0.2
Ttc3O88196 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.32■□□□□ 0.2
Ttc3O88196 Thap2-203ENSMUST00000218989 527 ntBASIC16.32■□□□□ 0.2
Ttc3O88196 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc3O88196 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc3O88196 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc3O88196 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc3O88196 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ttc3O88196 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ttc3O88196 App-207ENSMUST00000227737 2827 ntBASIC16.32■□□□□ 0.2
Ttc3O88196 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc3O88196 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ttc3O88196 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc3O88196 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc3O88196 Gm45612-201ENSMUST00000211320 160 ntBASIC16.31■□□□□ 0.2
Ttc3O88196 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc3O88196 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc3O88196 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc3O88196 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc3O88196 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ttc3O88196 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc3O88196 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc3O88196 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ttc3O88196 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc3O88196 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc3O88196 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.31■□□□□ 0.2
Ttc3O88196 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.31■□□□□ 0.2
Ttc3O88196 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ttc3O88196 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc3O88196 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ttc3O88196 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc3O88196 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.31■□□□□ 0.2
Ttc3O88196 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc3O88196 Gm11745-201ENSMUST00000121669 448 ntBASIC16.31■□□□□ 0.2
Ttc3O88196 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc3O88196 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ttc3O88196 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ttc3O88196 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ttc3O88196 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc3O88196 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ttc3O88196 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc3O88196 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc3O88196 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ttc3O88196 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc3O88196 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc3O88196 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc3O88196 Auts2-212ENSMUST00000178555 309 ntBASIC16.3■□□□□ 0.2
Ttc3O88196 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc3O88196 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc3O88196 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ttc3O88196 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc3O88196 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc3O88196 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc3O88196 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc3O88196 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc3O88196 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc3O88196 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ttc3O88196 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc3O88196 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.29■□□□□ 0.2
Ttc3O88196 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ttc3O88196 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.29■□□□□ 0.2
Ttc3O88196 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.29■□□□□ 0.2
Ttc3O88196 Mir6990-201ENSMUST00000183724 91 ntBASIC16.29■□□□□ 0.2
Ttc3O88196 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ttc3O88196 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc3O88196 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc3O88196 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms