Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vamp4O70480 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.71■□□□□ 0.75
Vamp4O70480 Gm18489-201ENSMUST00000172565 551 ntBASIC19.71■□□□□ 0.75
Vamp4O70480 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vamp4O70480 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Vamp4O70480 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.71■□□□□ 0.75
Vamp4O70480 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.71■□□□□ 0.75
Vamp4O70480 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.71■□□□□ 0.75
Vamp4O70480 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Vamp4O70480 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vamp4O70480 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vamp4O70480 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vamp4O70480 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vamp4O70480 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vamp4O70480 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vamp4O70480 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vamp4O70480 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Vamp4O70480 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vamp4O70480 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Vamp4O70480 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vamp4O70480 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vamp4O70480 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vamp4O70480 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vamp4O70480 Gm1401-201ENSMUST00000122048 772 ntBASIC19.7■□□□□ 0.74
Vamp4O70480 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.7■□□□□ 0.74
Vamp4O70480 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.7■□□□□ 0.74
Vamp4O70480 Gm4899-201ENSMUST00000178708 719 ntBASIC19.7■□□□□ 0.74
Vamp4O70480 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vamp4O70480 Gm8318-201ENSMUST00000182954 872 ntBASIC19.7■□□□□ 0.74
Vamp4O70480 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.7■□□□□ 0.74
Vamp4O70480 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.7■□□□□ 0.74
Vamp4O70480 Gm9682-201ENSMUST00000197505 556 ntBASIC19.7■□□□□ 0.74
Vamp4O70480 AW822252-206ENSMUST00000208904 237 ntBASIC19.7■□□□□ 0.74
Vamp4O70480 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Vamp4O70480 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vamp4O70480 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vamp4O70480 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vamp4O70480 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Vamp4O70480 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Vamp4O70480 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.7■□□□□ 0.74
Vamp4O70480 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vamp4O70480 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vamp4O70480 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vamp4O70480 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vamp4O70480 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.69■□□□□ 0.74
Vamp4O70480 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.69■□□□□ 0.74
Vamp4O70480 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.69■□□□□ 0.74
Vamp4O70480 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.69■□□□□ 0.74
Vamp4O70480 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.69■□□□□ 0.74
Vamp4O70480 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp4O70480 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Vamp4O70480 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp4O70480 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp4O70480 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp4O70480 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp4O70480 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp4O70480 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vamp4O70480 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp4O70480 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.68■□□□□ 0.74
Vamp4O70480 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp4O70480 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp4O70480 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.68■□□□□ 0.74
Vamp4O70480 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.68■□□□□ 0.74
Vamp4O70480 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp4O70480 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.68■□□□□ 0.74
Vamp4O70480 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.68■□□□□ 0.74
Vamp4O70480 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp4O70480 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.68■□□□□ 0.74
Vamp4O70480 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.68■□□□□ 0.74
Vamp4O70480 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp4O70480 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp4O70480 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.68■□□□□ 0.74
Vamp4O70480 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Vamp4O70480 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp4O70480 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp4O70480 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.68■□□□□ 0.74
Vamp4O70480 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms