Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.4□□□□□ -0.42
Pde6dO55057 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.4□□□□□ -0.42
Pde6dO55057 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pde6dO55057 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.4□□□□□ -0.42
Pde6dO55057 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.4□□□□□ -0.42
Pde6dO55057 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pde6dO55057 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pde6dO55057 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pde6dO55057 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pde6dO55057 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pde6dO55057 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Pde6dO55057 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pde6dO55057 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pde6dO55057 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pde6dO55057 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Gm11249-201ENSMUST00000117071 859 ntBASIC12.39□□□□□ -0.43
Pde6dO55057 Gm7638-201ENSMUST00000121348 967 ntBASIC12.39□□□□□ -0.43
Pde6dO55057 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.39□□□□□ -0.43
Pde6dO55057 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.39□□□□□ -0.43
Pde6dO55057 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pde6dO55057 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pde6dO55057 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pde6dO55057 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6dO55057 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Pde6dO55057 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.39□□□□□ -0.43
Pde6dO55057 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.39□□□□□ -0.43
Pde6dO55057 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.38□□□□□ -0.43
Pde6dO55057 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.38□□□□□ -0.43
Pde6dO55057 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.38□□□□□ -0.43
Pde6dO55057 Mir5133-201ENSMUST00000174955 77 ntBASIC12.38□□□□□ -0.43
Pde6dO55057 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pde6dO55057 Gm18115-201ENSMUST00000221209 621 ntBASIC12.38□□□□□ -0.43
Pde6dO55057 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Pde6dO55057 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pde6dO55057 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.38□□□□□ -0.43
Pde6dO55057 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Pde6dO55057 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pde6dO55057 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.38□□□□□ -0.43
Pde6dO55057 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pde6dO55057 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms