Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Stx1aO35526 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Stx1aO35526 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.64■□□□□ 0.41
Stx1aO35526 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Stx1aO35526 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Stx1aO35526 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stx1aO35526 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stx1aO35526 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Stx1aO35526 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stx1aO35526 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.63■□□□□ 0.41
Stx1aO35526 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.63■□□□□ 0.41
Stx1aO35526 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stx1aO35526 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stx1aO35526 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stx1aO35526 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stx1aO35526 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stx1aO35526 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Stx1aO35526 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Stx1aO35526 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.62■□□□□ 0.41
Stx1aO35526 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.62■□□□□ 0.41
Stx1aO35526 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Stx1aO35526 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Stx1aO35526 Gm7889-201ENSMUST00000185591 958 ntBASIC17.62■□□□□ 0.41
Stx1aO35526 Gm18959-201ENSMUST00000208954 655 ntBASIC17.62■□□□□ 0.41
Stx1aO35526 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Stx1aO35526 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Stx1aO35526 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Stx1aO35526 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Stx1aO35526 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Stx1aO35526 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Stx1aO35526 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Stx1aO35526 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.62■□□□□ 0.41
Stx1aO35526 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Stx1aO35526 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.61■□□□□ 0.41
Stx1aO35526 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Gm27389-201ENSMUST00000183622 195 ntBASIC17.61■□□□□ 0.41
Stx1aO35526 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.61■□□□□ 0.41
Stx1aO35526 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Stx1aO35526 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.61■□□□□ 0.41
Stx1aO35526 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Stx1aO35526 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Stx1aO35526 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Stx1aO35526 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stx1aO35526 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.6■□□□□ 0.41
Stx1aO35526 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stx1aO35526 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stx1aO35526 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.6■□□□□ 0.41
Stx1aO35526 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.6■□□□□ 0.41
Stx1aO35526 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.6■□□□□ 0.41
Stx1aO35526 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.6■□□□□ 0.41
Stx1aO35526 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Stx1aO35526 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stx1aO35526 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Stx1aO35526 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.6■□□□□ 0.41
Stx1aO35526 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stx1aO35526 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Stx1aO35526 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Stx1aO35526 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Stx1aO35526 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stx1aO35526 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stx1aO35526 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Stx1aO35526 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Stx1aO35526 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Stx1aO35526 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Stx1aO35526 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.59■□□□□ 0.41
Stx1aO35526 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.59■□□□□ 0.41
Stx1aO35526 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Stx1aO35526 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.59■□□□□ 0.41
Stx1aO35526 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.59■□□□□ 0.41
Stx1aO35526 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Stx1aO35526 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Stx1aO35526 Gm21559-201ENSMUST00000220638 855 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms