Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.73□□□□□ -0.05
Cx3cl1O35188 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cx3cl1O35188 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm8825-201ENSMUST00000182565 998 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm4518-201ENSMUST00000182638 718 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.72□□□□□ -0.05
Cx3cl1O35188 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cx3cl1O35188 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cx3cl1O35188 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Gm6257-201ENSMUST00000163864 910 ntBASIC14.71□□□□□ -0.05
Cx3cl1O35188 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Gm8655-201ENSMUST00000221159 852 ntBASIC14.71□□□□□ -0.05
Cx3cl1O35188 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cx3cl1O35188 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cx3cl1O35188 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cx3cl1O35188 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cx3cl1O35188 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms