Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atn1O35126 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atn1O35126 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atn1O35126 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atn1O35126 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atn1O35126 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atn1O35126 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atn1O35126 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atn1O35126 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Atn1O35126 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Atn1O35126 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.31■□□□□ 0.04
Atn1O35126 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.31■□□□□ 0.04
Atn1O35126 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Atn1O35126 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atn1O35126 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Atn1O35126 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.31■□□□□ 0.04
Atn1O35126 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atn1O35126 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atn1O35126 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atn1O35126 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atn1O35126 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atn1O35126 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atn1O35126 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.31■□□□□ 0.04
Atn1O35126 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atn1O35126 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atn1O35126 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Atn1O35126 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Atn1O35126 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Gm6623-201ENSMUST00000173570 544 ntBASIC15.3■□□□□ 0.04
Atn1O35126 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.3■□□□□ 0.04
Atn1O35126 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.3■□□□□ 0.04
Atn1O35126 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Atn1O35126 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.3■□□□□ 0.04
Atn1O35126 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.3■□□□□ 0.04
Atn1O35126 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atn1O35126 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Atn1O35126 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Atn1O35126 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Atn1O35126 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Atn1O35126 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Atn1O35126 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Atn1O35126 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Gm9013-201ENSMUST00000132939 882 ntBASIC15.29■□□□□ 0.04
Atn1O35126 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Atn1O35126 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Atn1O35126 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Atn1O35126 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Atn1O35126 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Atn1O35126 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Atn1O35126 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atn1O35126 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.29■□□□□ 0.04
Atn1O35126 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.28■□□□□ 0.04
Atn1O35126 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Atn1O35126 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atn1O35126 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atn1O35126 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atn1O35126 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atn1O35126 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.28■□□□□ 0.04
Atn1O35126 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Atn1O35126 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.28■□□□□ 0.04
Atn1O35126 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atn1O35126 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atn1O35126 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.28■□□□□ 0.04
Atn1O35126 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms